Selecting an Application

What application can help me in MiGA @ XSEDE?

Different applications in MiGA @ XSEDE automate commonly used workflows in MiGA. Explore the different tabs to identify the workflow that works for you.

Important: Whenever possible, it's always better to submit a single task with many genomes instead of one task per genome

Indexing

Database Indexing

Index a collection of genomes to use as a custom MiGA database to query an unknown genome against this database or search the genomes of the database against each other by calculating the all-vs-all AAI and ANI matrixes.

Database Indexing

Classification

Typing

Dereplication